PHATRDRAFT_37291 (COG1096)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_37291 chr_12 (COG1096) 636203 636949 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0410

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
S1_like superfamily S1_like: Ribosomal protein S1-like RNA-binding domain. Found in a wide variety of RNA-associated... - 98.472 4.83E-26 114 - 209 superfamily 263921
ECR1_N superfamily Exosome complex exonuclease RRP4 N-terminal region; ECR1_N is an N-terminal region of the exosome... - 57.7896 8.81E-12 29 - 61 superfamily 258551
ECR1_N superfamily Exosome complex exonuclease RRP4 N-terminal region; ECR1_N is an N-terminal region of the exosome... - 57.7896 8.81E-12 29 - 61 superfamily 258551
COG1096 Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation,... - 123.601 1.98E-34 26 - 244 multi-dom 224021

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
10905 Not available 187222 179017 73908 Cre07.g312750.t1.2 AT5G38890.1 510564

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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