PHATRDRAFT_37877 jumonji domain containing 5 (Cupin_8)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_37877	chr_14	jumonji domain containing 5 (Cupin_8)	296123	297016	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0074

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0045	0.40

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Cupin_8		Cupin-like domain; This cupin like domain shares similarity to the JmjC domain.	cl19305	143.259	1.09E-40	74 - 297	specific	257933
Cupin_8 superfamily		Cupin-like domain; This cupin like domain shares similarity to the JmjC domain.	-	143.259	1.09E-40	74 - 297	superfamily	267658

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	175169	194234	213927	Not available	AT3G20810.1	472104

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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