PHATRDRAFT_39074 (PUB)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_39074 chr_18 (PUB) 261757 263105 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0320

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0013
 0.38

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PUB PNGase/UBA or UBX (PUB) domain of p97 adaptor proteins; The PUB domain is found in p97 adaptor... cl15262 63.17 2.10E-12 295 - 369 specific 198416
PUB superfamily PNGase/UBA or UBX (PUB) domain of p97 adaptor proteins; The PUB domain is found in p97 adaptor... - 63.17 2.10E-12 295 - 369 superfamily 265658
pVHL superfamily von Hippel-Landau (pVHL) tumor suppressor protein; von Hippel-Landau (pVHL) protein, the gene... - 39.7601 0.000218006 165 - 230 superfamily 176599

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 236042 288079 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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