PHATRDRAFT_39402 early-responsive to dehydration erd (DUF221 superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_39402 chr_19 early-responsive to dehydration erd (DUF221 superfamily) 409446 411910 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0083

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0122
 0.44

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DUF221 superfamily Domain of unknown function DUF221; This family consists of hypothetical transmembrane proteins none... - 180.796 7.39E-51 342 - 669 superfamily 251491
RSN1_TM superfamily Late exocytosis, associated with Golgi transport; This family represents the first three... - 135.327 1.55E-36 16 - 166 superfamily 258219
RSN1_TM superfamily Late exocytosis, associated with Golgi transport; This family represents the first three... - 135.327 1.55E-36 16 - 166 superfamily 258219
DUF4463 superfamily Domain of unknown function (DUF4463); This is a cytosolic (predicted) domain present in integral... - 58.3992 1.62E-10 228 - 292 superfamily 258841
DUF4463 superfamily Domain of unknown function (DUF4463); This is a cytosolic (predicted) domain present in integral... - 58.3992 1.62E-10 228 - 292 superfamily 258841

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available AT4G22120.6 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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