PHATRDRAFT_39605 mechanosensitive ion channel domain-containing (MS_channel superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_39605	chr_20	mechanosensitive ion channel domain-containing (MS_channel superfamily)	245918	249422	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0361

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0171	0.38	4.9 9300

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
MS_channel superfamily		Mechanosensitive ion channel; Two members of this protein family from M. jannaschii have been...	-	64.9102	8.46E-12	773 - 908	superfamily	250229
MscS		Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane]	-	61.8602	2.47E-10	773 - 925	multi-dom	223740

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	255455	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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