PHATRDRAFT_39785 heat shock transcription factor 4 isoform 1 (HSF_DNA-bind)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_39785	chr_21	heat shock transcription factor 4 isoform 1 (HSF_DNA-bind)	31934	33203	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0414

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0092	0.51	1500 4400

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
HSF_DNA-bind		HSF-type DNA-binding; HSF-type DNA-binding.	cl12113	103.734	1.51E-27	19 - 113	specific	249865
HSF_DNA-bind superfamily		HSF-type DNA-binding; HSF-type DNA-binding.	-	103.734	1.51E-27	19 - 113	superfamily	264552

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments