PHATRDRAFT_40171 small gtp-binding (Rab)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_40171 chr_22 small gtp-binding (Rab) 312699 313866 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0036

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Rab Ras-related in brain (Rab) family of small guanosine triphosphatases (GTPases); Rab GTPases form... cl17170 105.616 2.11E-27 25 - 181 specific 206640
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 105.616 2.11E-27 25 - 181 superfamily 266525
COG1100 GTPase SAR1 and related small G proteins [General function prediction only] - 79.6195 1.16E-17 20 - 230 multi-dom 224025

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available 300959 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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