PHATRDRAFT_40578 ubiquitin-protein ligase e3-alpha-like protein (zf-UBR)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_40578 chr_24 ubiquitin-protein ligase e3-alpha-like protein (zf-UBR) 329600 332419 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0224

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0135
 0.29

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
zf-UBR Putative zinc finger in N-recognin (UBR box); This region is found in E3 ubiquitin ligases that... cl19744 107.841 1.19E-27 146 - 215 specific 251157
zf-UBR superfamily Putative zinc finger in N-recognin (UBR box); This region is found in E3 ubiquitin ligases that... - 107.841 1.19E-27 146 - 215 superfamily 268097

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
22947 Not available 136323 224722 Not available Not available AT5G02310.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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