PHATRDRAFT_40822 sh3 domain ysc-like 1 (SYLF)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_40822	chr_26	sh3 domain ysc-like 1 (SYLF)	25111	26112	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0377

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0025	0.39

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SYLF		The SYLF domain (also called DUF500), a novel lipid-binding module; The SYLF domain is named after...	cl01109	108.832	2.69E-28	33 - 264	specific	211400
SYLF superfamily		The SYLF domain (also called DUF500), a novel lipid-binding module; The SYLF domain is named after...	-	108.832	2.69E-28	33 - 264	superfamily	260792

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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