PHATRDRAFT_41413 probable oxidoreductase (PGDH)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_41413	chr_30	probable oxidoreductase (PGDH)	106060	107193	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0486

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0036	0.38	0.00000000000011 46000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PGDH		Prostaglandin dehydrogenases; Prostaglandins and related eicosanoids are metabolized by the...	cl16912	233.528	2.50E-73	9 - 364	specific	176190
MDR superfamily		Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family; The...	-	233.528	2.50E-73	9 - 364	superfamily	266485
B4_12hDH		leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase; Leukotriene B4 12-...	-	126.649	3.00E-33	9 - 355	multi-dom	131872

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
263685		Not available	159663	49870	217293	Not available	AT5G17000.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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