PHATRDRAFT_41778 26s proteasome subunit 4 (AAA)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_41778	chr_3	26s proteasome subunit 4 (AAA)	208575	209429	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0183

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0125	0.29	3.9 3700

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AAA		The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an...	cl18944	101.839	1.91E-26	32 - 199	specific	99707
AAA superfamily		The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an...	-	101.839	1.91E-26	32 - 199	superfamily	267297
AAA		ATPases associated with a variety of cellular activities; AAA - ATPases associated with a variety...	-	77.7989	7.66E-18	62 - 201	multi-dom	214640

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
39157		Not available	173131	257933	444500	Cre07.g329700.t1.2	AT4G29040.1	354148

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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