PHATRDRAFT_42307 translation initiation factor 2 gamma subunit (PTZ00327)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_42307 chr_23 translation initiation factor 2 gamma subunit (PTZ00327) 45215 46930 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0218

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0160
 0.36

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
eIF2_gamma Gamma subunit of initiation factor 2 (eIF2 gamma); eIF2 is a heterotrimeric translation initiation... cl17170 318.443 4.66E-107 46 - 231 specific 206675
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 318.443 4.66E-107 46 - 231 superfamily 266525
eIF2_gamma_II eIF2_gamma_II: this subfamily represents the domain II of the gamma subunit of eukaryotic... cl02787 214.688 5.49E-68 232 - 344 specific 239659
Translation_Factor_II_like superfamily Translation_Factor_II_like: Elongation factor Tu (EF-Tu) domain II-like proteins. Elongation factor... - 214.688 5.49E-68 232 - 344 superfamily 261449
eIF2_C superfamily Initiation factor eIF2 gamma, C terminal; Members of this family, which are found in the initiation... - 153.503 4.41E-45 350 - 441 superfamily 150009
eIF2_C superfamily Initiation factor eIF2 gamma, C terminal; Members of this family, which are found in the initiation... - 153.503 4.41E-45 350 - 441 superfamily 150009
PTZ00327 eukaryotic translation initiation factor 2 gamma subunit; Provisional - 784.963 0 17 - 452 multi-dom 240362

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
7322 Not available 261817 62730 62317 Cre02.g098450.t1.2 AT2G18720.1 325378

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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