PHATRDRAFT_42429 (Deadenylase_CCR4)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_42429 chr_1 (Deadenylase_CCR4) 30594 32471 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0334

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Deadenylase_CCR4 C-terminal deadenylase domain of CCR4 and related domains; This subfamily contains the C-terminal... cl00490 480.262 5.58E-166 288 - 619 specific 197331
EEP superfamily Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily; This large superfamily includes the... - 480.262 5.58E-166 288 - 619 superfamily 260458
PLN03144 Carbon catabolite repressor protein 4 homolog; Provisional - 359.428 4.05E-115 12 - 618 multi-dom 178689

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
10811 Not available 278943 40148 219492 Cre11.g475900.t1.2 AT3G58560.1 359974

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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