PHATRDRAFT_42642 exonuclease familyexpressed (REX1_like)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_42642	chr_1	exonuclease familyexpressed (REX1_like)	681624	683714	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0396

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0175	0.30	490 6900

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
REX1_like		DEDDh 3'-5' exonuclease domain of RNA exonuclease 1, -3 and similar eukaryotic...	cl10012	204.256	1.17E-61	368 - 525	specific	99848
DnaQ_like_exo superfamily		DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily; The DnaQ-like...	-	204.256	1.17E-61	368 - 525	superfamily	263941

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	267794	131475	Not available	Not available	AT5G25800.1	479170

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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