PHATRDRAFT_42741 tpr repeat protein (Sulfotransfer_1 superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_42741	chr_1	tpr repeat protein (Sulfotransfer_1 superfamily)	943420	945648	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0108

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0078	0.34	48000 29000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TPR superfamily		Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF...	-	55.8492	1.92E-09	280 - 363	superfamily	238112
TPR superfamily		Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF...	-	55.8492	1.92E-09	280 - 363	superfamily	238112
Sulfotransfer_1 superfamily		Sulfotransferase domain; Sulfotransferase domain.	-	63.5139	2.05E-11	471 - 710	superfamily	267592
TPR_11		TPR repeat; TPR repeat.	-	43.0711	2.54E-05	280 - 343	multi-dom	257739

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
268904		Not available	171705	304405	Not available	Cre10.g465450.t1.2	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments