PHATRDRAFT_43026 nuclear autoantigenic sperm protein (histone-binding)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_43026	chr_1	nuclear autoantigenic sperm protein (histone-binding)	1829285	1830766	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0448

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SHNi-TPR superfamily		SHNi-TPR; SHNi-TPR family members contain a reiterated sequence motif that is an interrupted form...	-	34.7706	0.00615252	205 - 238	superfamily	256040
TPR superfamily		Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF...	-	35.0484	0.00684763	181 - 261	superfamily	238112
TPR_12		Tetratricopeptide repeat; Tetratricopeptide repeat.	-	36.9714	0.00123488	202 - 290	multi-dom	257749

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
25304		Not available	265512	258960	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments