PHATRDRAFT_43065 e2f transcription factor 2 (E2F_TDP)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_43065	chr_1	e2f transcription factor 2 (E2F_TDP)	1947669	1948927	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0409

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0163	0.35	55000 64000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
E2F_TDP superfamily		E2F/DP family winged-helix DNA-binding domain; This family contains the transcription factor E2F...	-	77.6075	4.56E-18	86 - 146	superfamily	251219
E2F_TDP superfamily		E2F/DP family winged-helix DNA-binding domain; This family contains the transcription factor E2F...	-	77.6075	4.56E-18	86 - 146	superfamily	251219
YlqD superfamily		YlqD protein; The structure of a representative of this family has been solved (pdb:4dci) and found...	-	37.1938	0.00133936	154 - 204	superfamily	256274

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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