PHATRDRAFT_43097 prolyl-trna synthetase (PRK08661)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_43097 chr_1 prolyl-trna synthetase (PRK08661) 2027102 2029117 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0038

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0249
 0.32

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ProRS_core_arch_euk Prolyl-tRNA synthetase (ProRS) class II core catalytic domain. ProRS is a homodimer. It is... cl00268 433.175 5.90E-148 174 - 447 specific 238401
class_II_aaRS-like_core superfamily Class II tRNA amino-acyl synthetase-like catalytic core domain. Class II amino acyl-tRNA... - 433.175 5.90E-148 174 - 447 superfamily 260313
HGTP_anticodon superfamily HGTP anticodon binding domain, as found at the C-terminus of histidyl, glycyl, threonyl and prolyl... - 190.972 3.50E-56 453 - 670 superfamily 260312
WHEP-TRS WHEP-TRS domain; WHEP-TRS domain. cl00349 46.1433 1.67E-06 94 - 132 specific 249876
S15_NS1_EPRS_RNA-bind superfamily S15/NS1/EPRS_RNA-binding domain. This short domain consists of a helix-turn-helix structure, which... - 46.1433 1.67E-06 94 - 132 superfamily 260373
PRK08661 prolyl-tRNA synthetase; Provisional - 745.035 0 166 - 670 multi-dom 236327

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
32053 Not available 175260 20643 103339 Cre09.g406200.t1.2 AT5G52520.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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