PHATRDRAFT_43311 set domain containing protein (SET)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_43311	chr_2	set domain containing protein (SET)	87861	89680	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0207

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0053	0.47	3600 3300

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SET		SET domain; SET domains are protein lysine methyltransferase enzymes. SET domains appear to be...	cl02566	50.5747	8.46E-08	308 - 345	specific	250181
SET superfamily		SET domain; SET domains are protein lysine methyltransferase enzymes. SET domains appear to be...	-	50.5747	8.46E-08	308 - 345	superfamily	261347
TPR_12		Tetratricopeptide repeat; Tetratricopeptide repeat.	-	36.9714	0.00180823	442 - 514	multi-dom	257749

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
24038		Not available	270617	6810	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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