PHATRDRAFT_43401 tipd_dicdi protein tipd (WD40)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_43401 chr_2 tipd_dicdi protein tipd (WD40) 352301 354146 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0145

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0023
 0.40

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 199.098 8.57E-59 265 - 564 superfamily 238121
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 199.098 8.57E-59 265 - 564 superfamily 238121
DUF745 superfamily Protein of unknown function (DUF745); This family consists of several uncharacterized Drosophila... - 39.2269 0.00102613 51 - 167 superfamily 253155
ATG16 Autophagy protein 16 (ATG16); Autophagy is a ubiquitous intracellular degradation system for... - 47.1401 1.93E-06 1 - 202 multi-dom 254922
COG2319 FOG: WD40 repeat [General function prediction only] - 130.979 3.02E-33 262 - 563 multi-dom 225201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
262070 Not available 180766 294039 Not available Not available AT5G50230.1 317644

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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