PHATRDRAFT_43419 nhp6_klula non-histone chromosomal protein 6 (HMGB-UBF_HMG-box)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_43419	chr_2	nhp6_klula non-histone chromosomal protein 6 (HMGB-UBF_HMG-box)	411199	412230	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0418

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0012	0.51	2600 21000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
HMGB-UBF_HMG-box		HMGB-UBF_HMG-box, class II and III members of the HMG-box superfamily of DNA-binding proteins....	cl00082	60.3341	5.91E-12	33 - 114	specific	238686
HMG-box superfamily		High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and...	-	60.3341	5.91E-12	33 - 114	superfamily	260179
Ribosomal_L4 superfamily		Ribosomal protein L4/L1 family; This family includes Ribosomal L4/L1 from eukaryotes and...	-	38.4089	0.00140684	248 - 335	superfamily	260356

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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