PHATRDRAFT_43446 fog: ppr repeat (Methyltransf_4 superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_43446 chr_2 fog: ppr repeat (Methyltransf_4 superfamily) 471637 473880 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0202

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0118
 0.28

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Methyltransf_4 superfamily Putative methyltransferase; This is a family of putative methyltransferases. The aligned region... - 63.4888 1.21E-11 514 - 684 superfamily 266610
PPR_2 PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... cl03252 46.627 1.27E-06 160 - 207 specific 257477
PPR_2 superfamily PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... - 35.8414 0.00435708 131 - 173 superfamily 261658
PPR_2 superfamily PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... - 35.8414 0.00435708 131 - 173 superfamily 261658

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 248260 257595 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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