PHATRDRAFT_43473 tetratricopeptide repeat protein (Transglut_core2)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_43473	chr_2	tetratricopeptide repeat protein (Transglut_core2)	555284	556597	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0122

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0225	0.20	12 6.8

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Transglut_core2 superfamily		Transglutaminase-like superfamily; Transglutaminase-like superfamily.	-	129.714	9.39E-36	216 - 363	superfamily	257696
Transglut_core2 superfamily		Transglutaminase-like superfamily; Transglutaminase-like superfamily.	-	129.714	9.39E-36	216 - 363	superfamily	257696

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
9454		Not available	Not available	126635	210137	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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