PHATRDRAFT_43529 histone stem-loop binding protein (SLBP_RNA_bind superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_43529	chr_2	histone stem-loop binding protein (SLBP_RNA_bind superfamily)	725435	726277	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0109

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0106	0.31	810 41000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SLBP_RNA_bind superfamily		Histone RNA hairpin-binding protein RNA-binding domain; This family represents the RNA-binding...	-	88.419	9.37E-23	56 - 124	superfamily	259381

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
268247		Not available	269351	178105	440067	Cre06.g286750.t1.2	Not available	519141

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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