PHATRDRAFT_43564 rad23 protein (rad23)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_43564 chr_2 rad23 protein (rad23) 824814 826259 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0246

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
UBA Ubiquitin Associated domain. The UBA domain is a commonly occurring sequence motif in some members... cl00153 40.5203 5.50E-05 368 - 402 specific 238116
UBA superfamily Ubiquitin Associated domain. The UBA domain is a commonly occurring sequence motif in some members... - 40.5203 5.50E-05 368 - 402 superfamily 260220
UBA Ubiquitin Associated domain. The UBA domain is a commonly occurring sequence motif in some members... cl00153 40.5203 5.50E-05 368 - 402 specific 238116
UBA superfamily Ubiquitin Associated domain. The UBA domain is a commonly occurring sequence motif in some members... - 40.5203 5.50E-05 368 - 402 superfamily 260220
UBQ superfamily Ubiquitin-like proteins; Ubiquitin homologs; Includes ubiquitin and ubiquitin-like proteins.... - 98.9408 1.59E-25 1 - 76 superfamily 260222
XPC-binding superfamily XPC-binding domain; Members of this family adopt a structure consisting of four alpha helices,... - 78.0414 4.76E-18 198 - 255 superfamily 192241
XPC-binding superfamily XPC-binding domain; Members of this family adopt a structure consisting of four alpha helices,... - 78.0414 4.76E-18 198 - 255 superfamily 192241
rad23 UV excision repair protein Rad23; All proteins in this family for which functions are known are... - 204.359 6.30E-61 1 - 401 multi-dom 233045

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
263031 Not available 208711 254556 60498 Not available AT1G79650.2 553293

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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