PHATRDRAFT_43587 tpr-repeat containing protein (NrfG)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_43587 chr_2 tpr-repeat containing protein (NrfG) 890909 893842 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0174

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0043
 0.34

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 38.13 0.00130632 796 - 889 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 38.13 0.00130632 796 - 889 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 38.13 0.00130632 796 - 889 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 38.13 0.00130632 796 - 889 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 38.13 0.00130632 796 - 889 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 38.13 0.00130632 796 - 889 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 38.13 0.00130632 796 - 889 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 38.13 0.00130632 796 - 889 superfamily 238112
NrfG FOG: TPR repeat [General function prediction only] - 76.0381 3.86E-15 609 - 874 multi-dom 223533
TPR_11 TPR repeat; TPR repeat. - 35.3671 0.00897989 531 - 594 multi-dom 257739

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
262464 Not available 186421 225858 457455 Cre09.g416200.t1.2 AT3G17040.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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