PHATRDRAFT_43641 vacuolar sorting protein 9 domain-containing protein vps9 domain-containing protein (VPS9)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_43641 chr_2 vacuolar sorting protein 9 domain-containing protein vps9 domain-containing protein (VPS9) 1075160 1077013 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0386

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
VPS9 Vacuolar sorting protein 9 (VPS9) domain; This domain acts as a GDP-GTP exchange factor (GEF). It... cl19569 92.6496 2.34E-22 316 - 423 specific 251154
VPS9 superfamily Vacuolar sorting protein 9 (VPS9) domain; This domain acts as a GDP-GTP exchange factor (GEF). It... - 92.6496 2.34E-22 316 - 423 superfamily 267922

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 264921 20518 Not available Cre12.g547450.t1.2 AT3G19770.1 327908

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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