PHATRDRAFT_43649 nadph-dependent fmn fad containing (FNR_like superfamily)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_43649	chr_2	nadph-dependent fmn fad containing (FNR_like superfamily)	1098360	1100892	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0046

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0166	0.21	5.9 50000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
FNR_like superfamily		Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a...	-	240.253	2.19E-71	306 - 774	superfamily	263080
Flavodoxin_1		Flavodoxin; Flavodoxin.	cl00438	59.7073	1.68E-10	72 - 206	specific	249722
FMN_red superfamily		NADPH-dependent FMN reductase; NADPH-dependent FMN reductase.	-	59.7073	1.68E-10	72 - 206	superfamily	260423
CysJ		Sulfite reductase, alpha subunit (flavoprotein) [Inorganic ion transport and metabolism]	-	221.138	1.86E-62	72 - 774	multi-dom	223446

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
268560		Not available	272896	204414	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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