PHATRDRAFT_43699
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_43699 chr_2 1224664 1225885 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0373

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0185
 0.34

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
zf-MYND superfamily MYND finger; MYND finger. - 43.5627 3.86E-06 336 - 371 superfamily 250838
zf-MYND superfamily MYND finger; MYND finger. - 43.5627 3.86E-06 336 - 371 superfamily 250838
FBOX A Receptor for Ubiquitination Targets; A Receptor for Ubiquitination Targets. cl02535 37.031 0.000670961 116 - 152 specific 197608
F-box superfamily F-box domain; This domain is approximately 50 amino acids long, and is usually found in the N-... - 37.031 0.000670961 116 - 152 superfamily 261329
COG0790 FOG: TPR repeat, SEL1 subfamily [General function prediction only] - 44.2647 2.67E-05 190 - 259 multi-dom 223861

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 214476 239877 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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