PHATRDRAFT_43802 trna-splicing endonuclease positive effector-related (AAA_12)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_43802 chr_3 trna-splicing endonuclease positive effector-related (AAA_12) 47141 50787 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0070

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... cl18944 40.5923 0.000510458 536 - 634 specific 99707
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 40.5923 0.000510458 536 - 634 superfamily 267297
AAA_12 superfamily AAA domain; This family of domains contain a P-loop motif that is characteristic of the AAA... - 245.15 2.33E-74 889 - 1085 superfamily 257490
AAA_12 superfamily AAA domain; This family of domains contain a P-loop motif that is characteristic of the AAA... - 245.15 2.33E-74 889 - 1085 superfamily 257490
AAA_11 AAA domain; This family of domains contain a P-loop motif that is characteristic of the AAA... - 145.076 4.60E-39 531 - 881 multi-dom 257489

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
264317 Not available 229371 178458 Not available Cre06.g263800.t1.1 AT2G19120.1 359182

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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