PHATRDRAFT_43874 Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_43874	chr_3		285990	287308	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0366

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0150	0.31	0.0000036 12000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
EamA		EamA-like transporter family; This family includes many hypothetical membrane proteins of unknown...	cl17759	35.6819	0.00434583	139 - 195	specific	250209
EamA superfamily		EamA-like transporter family; This family includes many hypothetical membrane proteins of unknown...	-	35.6819	0.00434583	139 - 195	superfamily	266818

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
5659		Not available	190732	233444	Not available	Not available	Not available	482232

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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