PHATRDRAFT_43905 moloney leukemia virushomolog (AAA_12)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_43905 chr_3 moloney leukemia virushomolog (AAA_12) 390336 393535 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0131

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0077
 0.23

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DEXDc DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... cl17251 56.962 1.83E-09 568 - 691 specific 238005
DEXDc superfamily DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... - 56.962 1.83E-09 568 - 691 superfamily 266587
AAA_12 superfamily AAA domain; This family of domains contain a P-loop motif that is characteristic of the AAA... - 193.534 3.81E-56 744 - 955 superfamily 257490
AAA_12 superfamily AAA domain; This family of domains contain a P-loop motif that is characteristic of the AAA... - 193.534 3.81E-56 744 - 955 superfamily 257490
AAA_11 AAA domain; This family of domains contain a P-loop motif that is characteristic of the AAA... - 140.069 1.59E-37 546 - 737 multi-dom 257489
COG1112 Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and... - 168.216 3.29E-43 613 - 995 multi-dom 224037

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
269997 Not available 247975 323598 247007 Cre12.g542450.t1.2 AT1G05460.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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