PHATRDRAFT_43943 far-red impaired response protein
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_43943	chr_3	far-red impaired response protein	495554	497953	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0132

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0105	0.29	0.0053 390

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Transposase_mut superfamily		Transposase, Mutator family; Transposase, Mutator family.	-	42.8333	3.28E-05	198 - 288	superfamily	267890
SWIM		SWIM zinc finger; This domain is found in bacterial, archaeal and eukaryotic proteins. It is...	cl19527	36.2411	0.00366683	535 - 556	specific	252595
SWIM superfamily		SWIM zinc finger; This domain is found in bacterial, archaeal and eukaryotic proteins. It is...	-	36.2411	0.00366683	535 - 556	superfamily	267880

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments