PHATRDRAFT_43990 tho complex 3 (COG2319)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_43990	chr_3	tho complex 3 (COG2319)	632860	633801	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0051

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0081	0.30	0.00000017 120000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
WD40 superfamily		WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions...	-	81.2272	3.43E-18	2 - 293	superfamily	238121
COG2319		FOG: WD40 repeat [General function prediction only]	-	88.2219	7.67E-20	3 - 293	multi-dom	225201

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	231902	284879	Not available	Not available	AT5G56130.1	324947

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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