PHATRDRAFT_43994 replication factor c (activator 1)145kda (RFC1)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_43994 chr_3 replication factor c (activator 1)145kda (RFC1) 641490 644408 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0038

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... cl18944 64.8599 5.42E-12 412 - 540 specific 99707
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 64.8599 5.42E-12 412 - 540 superfamily 267297
BRCT Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain. The BRCT domain is found within... cl00038 53.8647 7.63E-09 203 - 271 specific 237994
BRCT superfamily Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain. The BRCT domain is found within... - 53.8647 7.63E-09 203 - 271 superfamily 260149
RFC1 superfamily Replication factor RFC1 C terminal domain; This is the C terminal domain of replication factor C,... - 138.11 3.31E-37 714 - 860 superfamily 254850
RFC1 superfamily Replication factor RFC1 C terminal domain; This is the C terminal domain of replication factor C,... - 138.11 3.31E-37 714 - 860 superfamily 254850
COG5275 BRCT domain type II [General function prediction only] - 75.5454 4.19E-15 31 - 278 multi-dom 227600

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
8542 Not available 212428 237322 467665 Cre12.g521200.t1.2 AT5G22010.1 304972

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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