PHATRDRAFT_44027 (RhaT)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_44027	chr_3	(RhaT)	735086	736529	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0294

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0242	0.42	740 10000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
RhaT		Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and...	-	60.2653	2.39E-10	194 - 471	multi-dom	223769
COG3827		Uncharacterized protein conserved in bacteria [Function unknown]	-	38.6788	0.00170066	20 - 145	multi-dom	226348

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
1197		Not available	Not available	Not available	Not available	Not available	Not available	494151

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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