PHATRDRAFT_44147 gaf domain (DUF2453)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_44147 chr_3 gaf domain (DUF2453) 1121090 1122285 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0230

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0103
 0.38

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DUF2453 superfamily Protein of unknown function (DUF2453); Some members of this family are purported to contain GAF... - 137.85 7.98E-40 98 - 207 superfamily 151064
DUF2453 superfamily Protein of unknown function (DUF2453); Some members of this family are purported to contain GAF... - 137.85 7.98E-40 98 - 207 superfamily 151064
GAF_3 GAF domain; GAF domain. cl17456 37.4241 0.00100051 240 - 346 specific 257816
GAF superfamily GAF domain; This domain is present in cGMP-specific phosphodiesterases, adenylyl and guanylyl... - 37.4241 0.00100051 240 - 346 superfamily 266697

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
269927 Not available 273458 Not available 468678 Cre03.g171550.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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