PHATRDRAFT_44203 (Peptidase_M11 superfamily)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_44203	chr_3	(Peptidase_M11 superfamily)	1300825	1302882	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0337

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0055	0.36	1500 14000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Peptidase_M11 superfamily		Gametolysin peptidase M11; In the unicellular biflagellated alga, Chlamydomonas reinhardtii,...	-	57.5497	3.29E-09	175 - 390	superfamily	253246
PT superfamily		PT repeat; This short repeat is composed on the tetrapeptide XPTX. This repeat is found in a...	-	38.595	0.000443035	499 - 528	superfamily	113652
PT superfamily		PT repeat; This short repeat is composed on the tetrapeptide XPTX. This repeat is found in a...	-	38.595	0.000443035	499 - 528	superfamily	113652
RSN1_TM superfamily		Late exocytosis, associated with Golgi transport; This family represents the first three...	-	36.3304	0.00719526	600 - 652	superfamily	258219

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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