PHATRDRAFT_44224 (TRAM_LAG1_CLN8)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_44224	chr_3	(TRAM_LAG1_CLN8)	1351395	1352519	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0363

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0156	0.31	110 610

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TRAM_LAG1_CLN8		TLC domain; TLC domain.	cl02759	48.8168	3.69E-07	180 - 349	specific	252170
TRAM_LAG1_CLN8 superfamily		TLC domain; TLC domain.	-	48.8168	3.69E-07	180 - 349	superfamily	261432

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
2613		Not available	193790	254905	Not available	Cre16.g683700.t1.2	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments