PHATRDRAFT_44298 (MFS)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_44298 chr_4 (MFS) 149577 155544 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0317

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MFS superfamily The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that... - 140.527 1.76E-35 277 - 702 superfamily 119392
MFS superfamily The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that... - 140.527 1.76E-35 277 - 702 superfamily 119392
MIF4G Middle domain of eukaryotic initiation factor 4G (eIF4G); Also occurs in NMD2p and CBP80. The... cl02652 108.602 4.64E-26 1192 - 1415 specific 214713
MIF4G superfamily MIF4G domain; MIF4G is named after Middle domain of eukaryotic initiation factor 4G (eIF4G). Also... - 108.602 4.64E-26 1192 - 1415 superfamily 261392
MA3 superfamily MA3 domain; Domain in DAP-5, eIF4G, MA-3 and other proteins. Highly alpha-helical. May contain... - 56.493 3.86E-09 1561 - 1680 superfamily 243129
MFS_1 Major Facilitator Superfamily; Major Facilitator Superfamily. - 139.862 2.72E-35 278 - 664 multi-dom 254360

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
261778 Not available 157908 180065 448761 Not available AT5G57870.2 540634

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments