PHATRDRAFT_44321 polyhydroxyalkanoate depolymerase precursor (Transglut_core)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_44321 chr_4 polyhydroxyalkanoate depolymerase precursor (Transglut_core) 230946 232238 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0082

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0061
 0.31

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Transglut_core Transglutaminase-like superfamily; This family includes animal transglutaminases and other... cl17362 55.8926 7.47E-10 268 - 331 specific 250908
Transglut_core superfamily Transglutaminase-like superfamily; This family includes animal transglutaminases and other... - 55.8926 7.47E-10 268 - 331 superfamily 266651
COG1305 Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism] - 53.5191 2.98E-08 261 - 355 multi-dom 224224

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
9410 Not available 186477 307021 94965 Cre16.g653150.t1.2 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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