PHATRDRAFT_44394 riken cdna 2600005c20isoform cra_b (Nop52 superfamily)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_44394	chr_4	riken cdna 2600005c20isoform cra_b (Nop52 superfamily)	418138	420144	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0207

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0012	0.51	2600 21000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Nop52 superfamily		Nucleolar protein,Nop52; Nop52 believed to be involved in the generation of 28S rRNA.	-	136.214	1.58E-36	91 - 379	superfamily	253502

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
21397		Not available	243513	319753	Not available	Cre01.g019200.t1.1	AT5G20600.1	552619

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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