PHATRDRAFT_44486 peptidase m50 (S2P-M50_like_2)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_44486	chr_4	peptidase m50 (S2P-M50_like_2)	708858	711521	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0225

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0107	0.29	1500 220

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
S2P-M50_like_2		Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which...	cl10020	100.767	5.37E-24	586 - 796	specific	100081
S2P-M50 superfamily		Site-2 protease (S2P) class of zinc metalloproteases (MEROPS family M50) cleaves transmembrane...	-	100.767	5.37E-24	586 - 796	superfamily	245232
Striatin superfamily		Striatin family; Striatin is an intracellular protein which has a caveolin-binding motif, a coiled-...	-	37.7175	0.00214312	155 - 276	superfamily	254678
Peptidase_M50		Peptidase family M50; Peptidase family M50.	-	67.858	7.18E-13	593 - 788	multi-dom	251129

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
20920		Not available	277834	320829	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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