PHATRDRAFT_44551 (Chorein_N)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_44551 chr_4 (Chorein_N) 874228 886117 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0329

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0014
 0.30

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Chorein_N superfamily N-terminal region of Chorein, a TM vesicle-mediated sorter; Although mutations in the full-length... - 79.1349 2.15E-16 2 - 132 superfamily 257171
Chorein_N superfamily N-terminal region of Chorein, a TM vesicle-mediated sorter; Although mutations in the full-length... - 79.1349 2.15E-16 2 - 132 superfamily 257171
DUF1162 superfamily Protein of unknown function (DUF1162); This family represents a conserved region within several... - 68.482 4.23E-12 2907 - 3228 superfamily 253843

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 271405 324601 Not available Not available AT4G17140.3 474714

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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