PHATRDRAFT_44688 sensory box histidine kinase response regulator (GAF)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_44688	chr_4	sensory box histidine kinase response regulator (GAF)	1266336	1267955	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0485

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0242	0.42	740 10000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
GAF		GAF domain; This domain is present in cGMP-specific phosphodiesterases, adenylyl and guanylyl...	cl17456	49.5043	2.13E-07	56 - 198	specific	250726
GAF superfamily		GAF domain; This domain is present in cGMP-specific phosphodiesterases, adenylyl and guanylyl...	-	49.5043	2.13E-07	56 - 198	superfamily	266697

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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