PHATRDRAFT_44694 m6 (immune inhibitor a) family (M6dom_TIGR03296)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_44694	chr_4	m6 (immune inhibitor a) family (M6dom_TIGR03296)	1285877	1289306	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0447

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0164	0.35	0.000000015 17000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
M6dom_TIGR03296		M6 family metalloprotease domain; This model describes a metalloproteinase domain, with a...	cl11525	195.714	8.78E-56	182 - 477	specific	234161
Peptidase_M6 superfamily		Immune inhibitor A peptidase M6; The insect pathogenic Gram-positive Bacillus thuringiensis...	-	195.714	8.78E-56	182 - 477	superfamily	245672
PT superfamily		PT repeat; This short repeat is composed on the tetrapeptide XPTX. This repeat is found in a...	-	42.8322	2.75E-05	705 - 738	superfamily	113652
PT superfamily		PT repeat; This short repeat is composed on the tetrapeptide XPTX. This repeat is found in a...	-	42.8322	2.75E-05	705 - 738	superfamily	113652
Mucin superfamily		Mucin-like glycoprotein; This family of trypanosomal proteins resemble vertebrate mucins. The...	-	36.7646	0.00793664	689 - 788	superfamily	250634

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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