PHATRDRAFT_44751 ribonuclease h i (RNase_HI_like)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_44751 chr_5 ribonuclease h i (RNase_HI_like) 129496 130862 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0312

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0095
 0.39

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RNase_HI_like RNAse HI family that includes archaeal, some bacterial as well as plant RNase HI; Ribonuclease H (... cl14782 129.13 4.41E-36 168 - 322 specific 260011
RNase_H_like superfamily Ribonuclease H-like superfamily, including RNase H, HI, HII, HIII, and RNase-like domain IV of... - 129.13 4.41E-36 168 - 322 superfamily 265450
Cauli_VI superfamily Caulimovirus viroplasmin; This family consists of various caulimovirus viroplasmin proteins. The... - 69.0894 3.83E-15 5 - 47 superfamily 250800
Cauli_VI superfamily Caulimovirus viroplasmin; This family consists of various caulimovirus viroplasmin proteins. The... - 69.0894 3.83E-15 5 - 47 superfamily 250800

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
2595 Not available 214263 258210 Not available Cre06.g272550.t1.2 AT3G01410.2 453462

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments