PHATRDRAFT_44761 -like protein with 3 ccch rna binding domains involved in rna metabolism
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_44761	chr_5	-like protein with 3 ccch rna binding domains involved in rna metabolism	160732	164001	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0409

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0213	0.25	17 87

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
NOT5		CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription]	-	43.8922	0.00020562	282 - 436	multi-dom	227952
PAT1		Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate...	-	43.6113	0.000291578	479 - 584	multi-dom	255543

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
22395		Not available	262248	306149	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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