PHATRDRAFT_44765 (Condensin2nSMC)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_44765	chr_5	(Condensin2nSMC)	172872	177078	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0109

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0057	0.32	13 11000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Condensin2nSMC superfamily		Condensin II non structural maintenance of chromosomes subunit; This domain family is found in...	-	185.56	1.66E-53	326 - 478	superfamily	204914
Condensin2nSMC superfamily		Condensin II non structural maintenance of chromosomes subunit; This domain family is found in...	-	185.56	1.66E-53	326 - 478	superfamily	204914

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
7100		Not available	234994	190970	450751	Cre06.g262800.t1.2	AT1G64960.1	310491

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments