PHATRDRAFT_44833 efgm_arath probable elongation factormitochondrial precursor (EF-G)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_44833 chr_5 efgm_arath probable elongation factormitochondrial precursor (EF-G) 361868 364244 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0226

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0152
 0.19

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
EF-G Elongation factor G (EF-G) family involved in both the elongation and ribosome recycling phases of... cl17170 424.212 2.59E-147 42 - 279 specific 206673
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 424.212 2.59E-147 42 - 279 superfamily 266525
Elongation_Factor_C superfamily Elongation factor G C-terminus. This domain includes the carboxyl terminal regions of elongation... - 126.281 2.73E-35 373 - 452 superfamily 261447
EFG_like_IV superfamily Elongation Factor G-like domain IV. This family includes the translational elongation factor termed... - 103.67 9.05E-27 285 - 368 superfamily 243187

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Cre11.g467553.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments